Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.03■□□□□ 0.16
Yme1l1O88967 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.03■□□□□ 0.16
Yme1l1O88967 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Yme1l1O88967 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Yme1l1O88967 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Yme1l1O88967 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Yme1l1O88967 Gm13216-201ENSMUST00000117145 591 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Gm13223-201ENSMUST00000118609 747 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Gm9824-201ENSMUST00000178707 561 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.02■□□□□ 0.16
Yme1l1O88967 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Yme1l1O88967 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.02■□□□□ 0.15
Yme1l1O88967 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
Yme1l1O88967 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.02■□□□□ 0.15
Yme1l1O88967 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Yme1l1O88967 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Yme1l1O88967 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Gm8410-201ENSMUST00000117225 605 ntBASIC16.01■□□□□ 0.15
Yme1l1O88967 Gm15693-201ENSMUST00000120470 637 ntBASIC16.01■□□□□ 0.15
Yme1l1O88967 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Gm27618-201ENSMUST00000183671 60 ntBASIC16.01■□□□□ 0.15
Yme1l1O88967 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Yme1l1O88967 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.01■□□□□ 0.15
Yme1l1O88967 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Yme1l1O88967 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Yme1l1O88967 Gm2810-201ENSMUST00000118681 990 ntBASIC16■□□□□ 0.15
Yme1l1O88967 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16■□□□□ 0.15
Yme1l1O88967 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Yme1l1O88967 Mir8102-201ENSMUST00000184148 139 ntBASIC16■□□□□ 0.15
Yme1l1O88967 Gm38225-201ENSMUST00000194001 393 ntBASIC16■□□□□ 0.15
Yme1l1O88967 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Yme1l1O88967 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16■□□□□ 0.15
Yme1l1O88967 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Yme1l1O88967 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16■□□□□ 0.15
Yme1l1O88967 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms