Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cops6O88545 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cops6O88545 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Gm22065-201ENSMUST00000103753 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm22066-201ENSMUST00000103761 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24932-201ENSMUST00000103763 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24115-201ENSMUST00000103799 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm22190-201ENSMUST00000103827 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm22191-201ENSMUST00000103831 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24721-201ENSMUST00000103849 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm28018-201ENSMUST00000103869 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm26399-201ENSMUST00000103937 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cops6O88545 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Gm25349-201ENSMUST00000177728 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm23616-201ENSMUST00000177797 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm25871-201ENSMUST00000177816 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24752-201ENSMUST00000178240 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24496-201ENSMUST00000178287 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm25649-201ENSMUST00000178476 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm25548-201ENSMUST00000178681 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm23147-201ENSMUST00000178841 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm26095-201ENSMUST00000179270 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm22171-201ENSMUST00000179283 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm23936-201ENSMUST00000179354 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm22619-201ENSMUST00000179516 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm25255-201ENSMUST00000179579 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24755-201ENSMUST00000179691 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm26506-201ENSMUST00000179692 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm25086-201ENSMUST00000179931 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm23243-201ENSMUST00000180047 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Gm24659-201ENSMUST00000180212 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm24169-201ENSMUST00000180244 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm23689-201ENSMUST00000180354 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm27359-201ENSMUST00000184153 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm27785-201ENSMUST00000184268 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm27466-201ENSMUST00000184396 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 Gm27703-201ENSMUST00000184836 110 ntBASIC18.67■□□□□ 0.58
Cops6O88545 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cops6O88545 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cops6O88545 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops6O88545 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.66■□□□□ 0.58
Cops6O88545 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.66■□□□□ 0.58
Cops6O88545 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.66■□□□□ 0.58
Cops6O88545 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.66■□□□□ 0.58
Cops6O88545 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cops6O88545 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops6O88545 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cops6O88545 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops6O88545 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops6O88545 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Cops6O88545 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cops6O88545 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.65■□□□□ 0.58
Cops6O88545 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cops6O88545 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.65■□□□□ 0.58
Cops6O88545 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Cops6O88545 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cops6O88545 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops6O88545 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops6O88545 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms