Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.83□□□□□ -0.03
Cacna1hO88427 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.83□□□□□ -0.03
Cacna1hO88427 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.83□□□□□ -0.03
Cacna1hO88427 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cacna1hO88427 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.83□□□□□ -0.04
Cacna1hO88427 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.83□□□□□ -0.04
Cacna1hO88427 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm26461-201ENSMUST00000175064 290 ntBASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.83□□□□□ -0.04
Cacna1hO88427 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.83□□□□□ -0.04
Cacna1hO88427 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cacna1hO88427 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 Gm14660-201ENSMUST00000119809 575 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Gm43179-201ENSMUST00000198797 275 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cacna1hO88427 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cacna1hO88427 Olfr582-201ENSMUST00000098212 960 ntBASIC14.82□□□□□ -0.04
Cacna1hO88427 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1hO88427 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cacna1hO88427 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cacna1hO88427 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Cacna1hO88427 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1hO88427 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.81□□□□□ -0.04
Cacna1hO88427 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Gm9522-201ENSMUST00000182394 926 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.81□□□□□ -0.04
Cacna1hO88427 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.81□□□□□ -0.04
Cacna1hO88427 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cacna1hO88427 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms