Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Rprl3-201ENSMUST00000157400 290 ntBASIC14.66□□□□□ -0.06
Vti1bO88384 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Gm17807-201ENSMUST00000186869 298 ntBASIC14.66□□□□□ -0.06
Vti1bO88384 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.66□□□□□ -0.06
Vti1bO88384 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vti1bO88384 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.66□□□□□ -0.06
Vti1bO88384 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.66□□□□□ -0.06
Vti1bO88384 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vti1bO88384 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.65□□□□□ -0.06
Vti1bO88384 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vti1bO88384 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vti1bO88384 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Vti1bO88384 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vti1bO88384 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Vti1bO88384 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Vti1bO88384 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.64□□□□□ -0.07
Vti1bO88384 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.64□□□□□ -0.07
Vti1bO88384 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vti1bO88384 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Vti1bO88384 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Vti1bO88384 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vti1bO88384 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms