Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Gm10139O88245 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC9.36□□□□□ -0.91
Gm10139O88245 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Gm10139O88245 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Gm10139O88245 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Gm10139O88245 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.36□□□□□ -0.91
Gm10139O88245 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm10139O88245 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm10139O88245 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm10139O88245 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Efs-202ENSMUST00000227037 2540 ntBASIC9.35□□□□□ -0.91
Gm10139O88245 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm15372-201ENSMUST00000120729 834 ntBASIC9.35□□□□□ -0.91
Gm10139O88245 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.35□□□□□ -0.91
Gm10139O88245 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm27867-201ENSMUST00000184778 125 ntBASIC9.35□□□□□ -0.91
Gm10139O88245 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm10139O88245 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC9.35□□□□□ -0.91
Gm10139O88245 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Gm10139O88245 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC9.35□□□□□ -0.91
Gm10139O88245 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm37736-201ENSMUST00000193564 2802 ntBASIC9.35□□□□□ -0.91
Gm10139O88245 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Gm10139O88245 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Gm10139O88245 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm10139O88245 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm10139O88245 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC9.34□□□□□ -0.91
Gm10139O88245 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm10139O88245 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Gm10139O88245 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm10139O88245 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms