Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SncaO55042 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.72□□□□□ -0.37
SncaO55042 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SncaO55042 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.72□□□□□ -0.37
SncaO55042 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SncaO55042 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SncaO55042 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
SncaO55042 Gm11950-201ENSMUST00000121615 838 ntBASIC12.72□□□□□ -0.37
SncaO55042 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Gm25016-201ENSMUST00000158399 131 ntBASIC12.72□□□□□ -0.37
SncaO55042 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.72□□□□□ -0.37
SncaO55042 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SncaO55042 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SncaO55042 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SncaO55042 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.71□□□□□ -0.37
SncaO55042 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
SncaO55042 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.71□□□□□ -0.37
SncaO55042 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.71□□□□□ -0.37
SncaO55042 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.71□□□□□ -0.37
SncaO55042 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SncaO55042 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SncaO55042 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SncaO55042 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SncaO55042 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SncaO55042 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SncaO55042 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SncaO55042 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SncaO55042 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SncaO55042 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.7□□□□□ -0.38
SncaO55042 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.7□□□□□ -0.38
SncaO55042 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SncaO55042 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SncaO55042 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.7□□□□□ -0.38
SncaO55042 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SncaO55042 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SncaO55042 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms