Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Slc1a4O35874 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc1a4O35874 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.01■□□□□ 0.47
Slc1a4O35874 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc1a4O35874 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc1a4O35874 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.01■□□□□ 0.47
Slc1a4O35874 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a4O35874 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Gm5421-201ENSMUST00000181698 2354 ntBASIC18■□□□□ 0.47
Slc1a4O35874 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Slc1a4O35874 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Slc1a4O35874 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
Slc1a4O35874 AC090659.1-201ENSMUST00000224334 768 ntBASIC18■□□□□ 0.47
Slc1a4O35874 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a4O35874 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.99■□□□□ 0.47
Slc1a4O35874 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Slc1a4O35874 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc1a4O35874 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Slc1a4O35874 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a4O35874 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Gm14494-201ENSMUST00000118786 435 ntBASIC17.98■□□□□ 0.47
Slc1a4O35874 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc1a4O35874 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.98■□□□□ 0.47
Slc1a4O35874 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc1a4O35874 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc1a4O35874 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a4O35874 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Slc1a4O35874 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms