Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Gm10566-201ENSMUST00000086739 996 ntBASIC16.66■□□□□ 0.26
Clcn6O35454 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcn6O35454 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn6O35454 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.66■□□□□ 0.26
Clcn6O35454 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn6O35454 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clcn6O35454 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn6O35454 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC16.65■□□□□ 0.26
Clcn6O35454 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcn6O35454 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn6O35454 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn6O35454 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clcn6O35454 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn6O35454 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Clcn6O35454 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn6O35454 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clcn6O35454 Gm22038-201ENSMUST00000157277 242 ntBASIC16.64■□□□□ 0.25
Clcn6O35454 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clcn6O35454 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC16.64■□□□□ 0.25
Clcn6O35454 Gm44061-201ENSMUST00000203962 1195 ntBASIC16.64■□□□□ 0.25
Clcn6O35454 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC16.64■□□□□ 0.25
Clcn6O35454 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.64■□□□□ 0.25
Clcn6O35454 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn6O35454 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcn6O35454 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Gm13474-201ENSMUST00000122466 815 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 Mir5130-201ENSMUST00000175160 84 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC16.63■□□□□ 0.25
Clcn6O35454 Gm7213-201ENSMUST00000215977 950 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 AC126673.2-201ENSMUST00000221052 686 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcn6O35454 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Clcn6O35454 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Phf7-203ENSMUST00000226565 1971 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.63■□□□□ 0.25
Clcn6O35454 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcn6O35454 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Actl10-202ENSMUST00000226583 1501 ntBASIC16.63■□□□□ 0.25
Clcn6O35454 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn6O35454 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn6O35454 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn6O35454 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Clcn6O35454 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcn6O35454 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn6O35454 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clcn6O35454 Gm13186-201ENSMUST00000118031 316 ntBASIC16.62■□□□□ 0.25
Clcn6O35454 Gm12591-201ENSMUST00000122407 1177 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms