Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.27■□□□□ 0.04
Gm3139J3QK78 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Gm2213-201ENSMUST00000197485 688 ntBASIC15.27■□□□□ 0.04
Gm3139J3QK78 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.27■□□□□ 0.04
Gm3139J3QK78 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm3139J3QK78 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm3139J3QK78 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Gm13597-201ENSMUST00000121239 375 ntBASIC15.26■□□□□ 0.03
Gm3139J3QK78 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.26■□□□□ 0.03
Gm3139J3QK78 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.26■□□□□ 0.03
Gm3139J3QK78 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm3139J3QK78 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm3139J3QK78 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Gm37935-201ENSMUST00000192012 982 ntBASIC15.25■□□□□ 0.03
Gm3139J3QK78 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.25■□□□□ 0.03
Gm3139J3QK78 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.25■□□□□ 0.03
Gm3139J3QK78 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.25■□□□□ 0.03
Gm3139J3QK78 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.25■□□□□ 0.03
Gm3139J3QK78 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm3139J3QK78 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.24■□□□□ 0.03
Gm3139J3QK78 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm3139J3QK78 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Gm3139J3QK78 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms