Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm15483-201ENSMUST00000120338 456 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm27437-201ENSMUST00000183429 107 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3tc1G3X9F6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Gm8410-201ENSMUST00000117225 605 ntBASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3tc1G3X9F6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Gm17837-201ENSMUST00000186435 985 ntBASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sh3tc1G3X9F6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3tc1G3X9F6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms