Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Colca2F8VPY8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Gm23984-201ENSMUST00000157139 203 ntBASIC14.44□□□□□ -0.1
Colca2F8VPY8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.44□□□□□ -0.1
Colca2F8VPY8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Colca2F8VPY8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.43□□□□□ -0.1
Colca2F8VPY8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Gm45384-201ENSMUST00000210451 277 ntBASIC14.43□□□□□ -0.1
Colca2F8VPY8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Colca2F8VPY8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm22189-201ENSMUST00000103822 86 ntBASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm11478-201ENSMUST00000117851 599 ntBASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm15653-201ENSMUST00000119247 907 ntBASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.42□□□□□ -0.1
Colca2F8VPY8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.42□□□□□ -0.1
Colca2F8VPY8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Colca2F8VPY8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Colca2F8VPY8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Colca2F8VPY8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Colca2F8VPY8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Colca2F8VPY8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Colca2F8VPY8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms