Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h13E9Q784 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Gm16476-201ENSMUST00000221544 139 ntBASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3h13E9Q784 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Celf4-206ENSMUST00000224553 1729 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Mir1247-201ENSMUST00000116706 82 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 AC159006.1-201ENSMUST00000226396 258 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 CT030657.3-201ENSMUST00000222707 1200 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h13E9Q784 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Gm9200-201ENSMUST00000118513 1354 ntBASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 AC162801.1-201ENSMUST00000220612 198 ntBASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h13E9Q784 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Gm12957-201ENSMUST00000117835 377 ntBASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Gm13464-201ENSMUST00000119418 935 ntBASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Gm15806-201ENSMUST00000120696 955 ntBASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h13E9Q784 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h13E9Q784 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h13E9Q784 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.78■□□□□ 0.92
Zc3h13E9Q784 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.78■□□□□ 0.92
Zc3h13E9Q784 Gm21854-201ENSMUST00000179901 471 ntBASIC20.78■□□□□ 0.92
Zc3h13E9Q784 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms