Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Gm13036-201ENSMUST00000117799 748 ntBASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Gm12350-201ENSMUST00000121208 462 ntBASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cpsf4lE9Q2N0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Gm10499-201ENSMUST00000174094 934 ntBASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cpsf4lE9Q2N0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms