Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Gm29541-201ENSMUST00000191351 678 ntBASIC13.74□□□□□ -0.21
Shank1D3YZU1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.74□□□□□ -0.21
Shank1D3YZU1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shank1D3YZU1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.73□□□□□ -0.21
Shank1D3YZU1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.73□□□□□ -0.21
Shank1D3YZU1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.73□□□□□ -0.21
Shank1D3YZU1 Gm10154-201ENSMUST00000084445 354 ntBASIC13.73□□□□□ -0.21
Shank1D3YZU1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shank1D3YZU1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.72□□□□□ -0.21
Shank1D3YZU1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Shank1D3YZU1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shank1D3YZU1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms