Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm28599-201ENSMUST00000189838 694 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21867-201ENSMUST00000189917 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm29269-201ENSMUST00000190087 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21722-201ENSMUST00000190153 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm28423-201ENSMUST00000190701 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21899-201ENSMUST00000190745 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21910-201ENSMUST00000191163 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21849-201ENSMUST00000191571 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm28678-201ENSMUST00000191593 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm20910-201ENSMUST00000193268 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Gm21871-201ENSMUST00000194621 696 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Mettl6-204ENSMUST00000227595 1027 ntBASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Shroom2A2ALU4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shroom2A2ALU4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Gm13350-201ENSMUST00000120519 479 ntBASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Gm27514-201ENSMUST00000183692 110 ntBASIC23.88■■□□□ 1.41
Shroom2A2ALU4 AC165157.4-201ENSMUST00000220587 139 ntBASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shroom2A2ALU4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm7584-201ENSMUST00000175829 940 ntBASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm29127-201ENSMUST00000188304 517 ntBASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm13216-201ENSMUST00000117145 591 ntBASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shroom2A2ALU4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Gm6013-201ENSMUST00000212264 699 ntBASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Shroom2A2ALU4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 CT010506.4-201ENSMUST00000225457 351 ntBASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shroom2A2ALU4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Gm6222-201ENSMUST00000120787 396 ntBASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Gm3961-201ENSMUST00000204425 994 ntBASIC23.84■■□□□ 1.41
Shroom2A2ALU4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms