Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav12-1A0N8R1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav12-1A0N8R1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Gm8344-201ENSMUST00000119813 856 ntBASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms