Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhgb8A0A140LI48 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm13312-201ENSMUST00000119631 718 ntBASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm44430-201ENSMUST00000203376 995 ntBASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhgb8A0A140LI48 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhgb8A0A140LI48 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdhgb8A0A140LI48 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Gm12895-201ENSMUST00000122214 226 ntBASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Birc2-201ENSMUST00000054878 378 ntBASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhgb8A0A140LI48 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms