Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm6257-201ENSMUST00000163864 910 ntBASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.71
Trav13d-4A0A0G2JFX3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm6623-201ENSMUST00000173570 544 ntBASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms