Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm6345-202ENSMUST00000180900 204 ntBASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ighv1-56A0A0A6YXG2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm13312-201ENSMUST00000119631 718 ntBASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-56A0A0A6YXG2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms