Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm18733-201ENSMUST00000173950 856 ntBASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm7222-201ENSMUST00000117512 906 ntBASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbc1A0A0A6YWV4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbc1A0A0A6YWV4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Mir5131-201ENSMUST00000175426 93 ntBASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm27646-201ENSMUST00000183989 110 ntBASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm2651-201ENSMUST00000203560 838 ntBASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbc1A0A0A6YWV4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms