Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav21-dv12A0A075B6C4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav21-dv12A0A075B6C4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav21-dv12A0A075B6C4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm15165-201ENSMUST00000118140 502 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm33142-201ENSMUST00000193913 867 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm9172-201ENSMUST00000212092 954 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav21-dv12A0A075B6C4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm14859-201ENSMUST00000117752 357 ntBASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm7367-201ENSMUST00000057611 492 ntBASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms