Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav7-6A0A075B640 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav7-6A0A075B640 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms