Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PdfS4R2K0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
PdfS4R2K0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.83□□□□□ -0.52
PdfS4R2K0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.83□□□□□ -0.52
PdfS4R2K0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.83□□□□□ -0.52
PdfS4R2K0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
PdfS4R2K0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.83□□□□□ -0.52
PdfS4R2K0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.83□□□□□ -0.52
PdfS4R2K0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
PdfS4R2K0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.83□□□□□ -0.52
PdfS4R2K0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Gm6659-201ENSMUST00000174752 547 ntBASIC11.82□□□□□ -0.52
PdfS4R2K0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Gm27389-201ENSMUST00000183622 195 ntBASIC11.82□□□□□ -0.52
PdfS4R2K0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.82□□□□□ -0.52
PdfS4R2K0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.82□□□□□ -0.52
PdfS4R2K0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.82□□□□□ -0.52
PdfS4R2K0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.82□□□□□ -0.52
PdfS4R2K0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
PdfS4R2K0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
PdfS4R2K0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Gm25016-201ENSMUST00000158399 131 ntBASIC11.81□□□□□ -0.52
PdfS4R2K0 Gm22697-201ENSMUST00000175194 63 ntBASIC11.81□□□□□ -0.52
PdfS4R2K0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
PdfS4R2K0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms