Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb2S4R1M3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2afb2S4R1M3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
H2afb2S4R1M3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
H2afb2S4R1M3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.38■□□□□ 0.05
H2afb2S4R1M3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2afb2S4R1M3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2afb2S4R1M3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb2S4R1M3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms