Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Gm11764-201ENSMUST00000120221 623 ntBASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hmg20bQ9Z104 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Mir8098-201ENSMUST00000184011 137 ntBASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hmg20bQ9Z104 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmg20bQ9Z104 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20bQ9Z104 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20bQ9Z104 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20bQ9Z104 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20bQ9Z104 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmg20bQ9Z104 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Gm6550-201ENSMUST00000187574 993 ntBASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Gm9682-201ENSMUST00000197505 556 ntBASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmg20bQ9Z104 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms