Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcb1Q9Z0H3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Smarcb1Q9Z0H3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Gm16198-201ENSMUST00000118766 670 ntBASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcb1Q9Z0H3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm8396-201ENSMUST00000057361 823 ntBASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm10154-201ENSMUST00000084445 354 ntBASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcb1Q9Z0H3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms