Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Gm27011-201ENSMUST00000182352 972 ntBASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cr1Q9Z0D9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Efs-202ENSMUST00000227037 2540 ntBASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cr1Q9Z0D9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cr1Q9Z0D9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cr1Q9Z0D9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms