Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Rps4l-201ENSMUST00000071745 943 ntBASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40aQ9R1C7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Gm8344-201ENSMUST00000119813 856 ntBASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.92■□□□□ 0.3
Prpf40aQ9R1C7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gm4535-201ENSMUST00000182274 558 ntBASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gm10355-201ENSMUST00000097146 517 ntBASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prpf40aQ9R1C7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.9■□□□□ 0.3
Prpf40aQ9R1C7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms