Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Gm25745-201ENSMUST00000174945 133 ntBASIC13.66□□□□□ -0.22
Nubp2Q9R061 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nubp2Q9R061 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Gm44771-201ENSMUST00000206975 626 ntBASIC13.65□□□□□ -0.22
Nubp2Q9R061 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.65□□□□□ -0.22
Nubp2Q9R061 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp2Q9R061 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.65□□□□□ -0.23
Nubp2Q9R061 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.65□□□□□ -0.23
Nubp2Q9R061 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nubp2Q9R061 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.64□□□□□ -0.23
Nubp2Q9R061 Gm6376-201ENSMUST00000209407 580 ntBASIC13.64□□□□□ -0.23
Nubp2Q9R061 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.64□□□□□ -0.23
Nubp2Q9R061 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp2Q9R061 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms