Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nubp1Q9R060 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm15427-201ENSMUST00000117288 531 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm18489-201ENSMUST00000172565 551 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm18595-201ENSMUST00000175736 1068 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.52□□□□□ -0.25
Nubp1Q9R060 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nubp1Q9R060 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm23547-201ENSMUST00000158210 271 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm27430-201ENSMUST00000184585 107 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Gm44333-201ENSMUST00000197168 107 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.51□□□□□ -0.25
Nubp1Q9R060 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nubp1Q9R060 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Mir6977-201ENSMUST00000184960 64 ntBASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm29013-201ENSMUST00000187431 237 ntBASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm38170-201ENSMUST00000195404 816 ntBASIC13.5□□□□□ -0.25
Nubp1Q9R060 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.5□□□□□ -0.25
Nubp1Q9R060 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nubp1Q9R060 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms