Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Gm11764-201ENSMUST00000120221 623 ntBASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shroom3Q9QXN0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shroom3Q9QXN0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm8318-201ENSMUST00000182954 872 ntBASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Gm18246-201ENSMUST00000221023 728 ntBASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shroom3Q9QXN0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Mir3113-201ENSMUST00000175478 76 ntBASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shroom3Q9QXN0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Gm7063-201ENSMUST00000186840 981 ntBASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shroom3Q9QXN0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms