Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm4Q9QXA5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm4Q9QXA5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Mir770-201ENSMUST00000103252 94 ntBASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm14722-201ENSMUST00000118943 689 ntBASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm12134-201ENSMUST00000122109 520 ntBASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm4Q9QXA5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Lsm4Q9QXA5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm4Q9QXA5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm4Q9QXA5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm4Q9QXA5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm43799-201ENSMUST00000201845 579 ntBASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm18101-201ENSMUST00000215769 548 ntBASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm4Q9QXA5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms