Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.45□□□□□ -0.1
SrfQ9JM73 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.45□□□□□ -0.1
SrfQ9JM73 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SrfQ9JM73 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.45□□□□□ -0.1
SrfQ9JM73 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SrfQ9JM73 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SrfQ9JM73 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SrfQ9JM73 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SrfQ9JM73 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.44□□□□□ -0.1
SrfQ9JM73 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.44□□□□□ -0.1
SrfQ9JM73 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.44□□□□□ -0.1
SrfQ9JM73 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SrfQ9JM73 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.44□□□□□ -0.1
SrfQ9JM73 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Gm27989-201ENSMUST00000184721 107 ntBASIC14.44□□□□□ -0.1
SrfQ9JM73 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.44□□□□□ -0.1
SrfQ9JM73 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SrfQ9JM73 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.43□□□□□ -0.1
SrfQ9JM73 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.43□□□□□ -0.1
SrfQ9JM73 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm12151-201ENSMUST00000121374 290 ntBASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.43□□□□□ -0.1
SrfQ9JM73 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SrfQ9JM73 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SrfQ9JM73 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SrfQ9JM73 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.42□□□□□ -0.1
SrfQ9JM73 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SrfQ9JM73 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SrfQ9JM73 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.42□□□□□ -0.1
SrfQ9JM73 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.42□□□□□ -0.1
SrfQ9JM73 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.42□□□□□ -0.1
SrfQ9JM73 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SrfQ9JM73 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SrfQ9JM73 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.41□□□□□ -0.1
SrfQ9JM73 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SrfQ9JM73 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SrfQ9JM73 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SrfQ9JM73 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SrfQ9JM73 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms