Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hmgn5Q9JL35 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgn5Q9JL35 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Gm13168-201ENSMUST00000121771 632 ntBASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgn5Q9JL35 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Hmgn5Q9JL35 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn5Q9JL35 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms