Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm9682-201ENSMUST00000197505 556 ntBASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 BC037039-201ENSMUST00000192003 2205 ntBASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ldb3Q9JKS4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb3Q9JKS4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Gm13036-201ENSMUST00000117799 748 ntBASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Gm12350-201ENSMUST00000121208 462 ntBASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb3Q9JKS4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Gm2651-201ENSMUST00000203560 838 ntBASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb3Q9JKS4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms