Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rbfox1Q9JJ43 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rbfox1Q9JJ43 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Gm8344-201ENSMUST00000119813 856 ntBASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rbfox1Q9JJ43 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rbfox1Q9JJ43 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms