Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ush1cQ9ES64 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ush1cQ9ES64 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Gm18115-201ENSMUST00000221209 621 ntBASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ush1cQ9ES64 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Gm36967-201ENSMUST00000193814 266 ntBASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ush1cQ9ES64 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ush1cQ9ES64 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ush1cQ9ES64 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ush1cQ9ES64 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.64■□□□□ 0.42
Ush1cQ9ES64 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm10231-201ENSMUST00000181584 441 ntBASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm44450-201ENSMUST00000199528 114 ntBASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Gm10175-202ENSMUST00000208752 441 ntBASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.64■□□□□ 0.41
Ush1cQ9ES64 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ush1cQ9ES64 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms