Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tubb3Q9ERD7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tubb3Q9ERD7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubb3Q9ERD7 Efs-202ENSMUST00000227037 2540 ntBASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.27■□□□□ 0.03
Tubb3Q9ERD7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms