Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Upf1Q9EPU0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm8969-201ENSMUST00000199694 526 ntBASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm24526-201ENSMUST00000082921 158 ntBASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Upf1Q9EPU0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Gm6013-201ENSMUST00000212264 699 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Upf1Q9EPU0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Upf1Q9EPU0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Gm5187-201ENSMUST00000117317 991 ntBASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Gm15782-201ENSMUST00000121073 445 ntBASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Upf1Q9EPU0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf1Q9EPU0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf1Q9EPU0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Upf1Q9EPU0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Upf1Q9EPU0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms