Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmg20aQ9DC33 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmg20aQ9DC33 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Actl10-202ENSMUST00000226583 1501 ntBASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmg20aQ9DC33 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Gm9731-201ENSMUST00000209480 747 ntBASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hmg20aQ9DC33 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmg20aQ9DC33 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms