Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2aQ9DB34 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp2aQ9DB34 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Gm6550-201ENSMUST00000187574 993 ntBASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Gm2651-201ENSMUST00000203560 838 ntBASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chmp2aQ9DB34 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Chmp2aQ9DB34 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Gm7222-201ENSMUST00000117512 906 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Gm15358-201ENSMUST00000119249 520 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Chmp2aQ9DB34 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms