Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Gm5587-201ENSMUST00000206270 674 ntBASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp5Q9D7S9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp5Q9D7S9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp5Q9D7S9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Chmp5Q9D7S9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Grk6-207ENSMUST00000225925 2769 ntBASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp5Q9D7S9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms