Protein–RNA interactions for Protein: Q9D5Q6

Speer4f1, MCG6381, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer4f1Q9D5Q6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Gm27741-201ENSMUST00000185060 237 ntBASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.08■□□□□ 0.81
Speer4f1Q9D5Q6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Speer4f1Q9D5Q6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Gm8318-201ENSMUST00000182954 872 ntBASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Speer4f1Q9D5Q6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Gm10060-201ENSMUST00000212002 111 ntBASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Speer4f1Q9D5Q6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Gm6550-201ENSMUST00000187574 993 ntBASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Speer4f1Q9D5Q6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms