Protein–RNA interactions for Protein: Q9D4U4

H2al3, H2A histone family member L3, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al3Q9D4U4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 BC037039-201ENSMUST00000192003 2205 ntBASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2al3Q9D4U4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H2al3Q9D4U4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H2al3Q9D4U4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Gm7506-201ENSMUST00000207758 815 ntBASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2al3Q9D4U4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.5□□□□□ -0.41
H2al3Q9D4U4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms