Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps33aQ9D2N9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps33aQ9D2N9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps33aQ9D2N9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Vps33aQ9D2N9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Vps33aQ9D2N9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33aQ9D2N9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33aQ9D2N9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps33aQ9D2N9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33aQ9D2N9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33aQ9D2N9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33aQ9D2N9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33aQ9D2N9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33aQ9D2N9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms