Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Gm23547-201ENSMUST00000158210 271 ntBASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ssu72Q9CY97 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm13312-201ENSMUST00000119631 718 ntBASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.27■□□□□ 0.04
Ssu72Q9CY97 Gm19164-201ENSMUST00000210667 640 ntBASIC15.27■□□□□ 0.04
Ssu72Q9CY97 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ssu72Q9CY97 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssu72Q9CY97 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ssu72Q9CY97 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ssu72Q9CY97 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ssu72Q9CY97 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm43799-201ENSMUST00000201845 579 ntBASIC15.26■□□□□ 0.03
Ssu72Q9CY97 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssu72Q9CY97 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Gm9172-201ENSMUST00000212092 954 ntBASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssu72Q9CY97 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ssu72Q9CY97 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms