Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smc3Q9CW03 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.1■□□□□ 0.49
Smc3Q9CW03 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.1■□□□□ 0.49
Smc3Q9CW03 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smc3Q9CW03 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Mir7071-201ENSMUST00000184847 69 ntBASIC18.09■□□□□ 0.49
Smc3Q9CW03 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.09■□□□□ 0.49
Smc3Q9CW03 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc3Q9CW03 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc3Q9CW03 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc3Q9CW03 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc3Q9CW03 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms