Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm27301-201ENSMUST00000184012 127 ntBASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm27300-201ENSMUST00000184085 97 ntBASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm27335-201ENSMUST00000184758 97 ntBASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Sec61bQ9CQS8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm14701-201ENSMUST00000117156 348 ntBASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm4899-201ENSMUST00000178708 719 ntBASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm37436-201ENSMUST00000193842 1085 ntBASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 AC158538.2-201ENSMUST00000225455 906 ntBASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Sec61bQ9CQS8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms