Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm7Q9CQQ8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm7Q9CQQ8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm7Q9CQQ8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Gm18246-201ENSMUST00000221023 728 ntBASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lsm7Q9CQQ8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.52■□□□□ 0.07
Lsm7Q9CQQ8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lsm7Q9CQQ8 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm14822-201ENSMUST00000122247 291 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Gm10175-201ENSMUST00000086013 645 ntBASIC15.5■□□□□ 0.07
Lsm7Q9CQQ8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms