Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim11Q99PQ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim11Q99PQ2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim11Q99PQ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim11Q99PQ2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim11Q99PQ2 Grk6-207ENSMUST00000225925 2769 ntBASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.51■□□□□ 0.39
Trim11Q99PQ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms